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Stereoisomers

 

A. Identifying Chiral Centers

A chiral center is an sp3 carbon (four single bonds) that has a different group at each bond. Remember to consider not just the next atom in the bond, but all the bonds that follow it when determining whether the group is the same.

>> Example 1

Do the following molecules have chiral centers? If so, what atoms are chiral centers?







Solution:

  1. This molecule has one chiral center. It is the carbon on the right side of the chain, with a methyl, hydroxyl, and hydrogen group. The fourth group has an isopropyl chain.
  2. This molecule also has one chiral center, which is the carbon in the center. The groups connected to this carbon are hydroxyl, ethyl, methyl, and hydrogen.
  3. This molecule has two chiral centers, the two carbons in the middle. The one on the left end is eliminated for its two hydrogen groups and the one on the right end has two methyl groups.

 

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B. Assigning R and S to Chiral Centers

The designation R or S depends on the orientation of the groups around the chiral center. If there is more than one chiral center, each one will be labeled R or S.

To designate the orientation, each group is assigned a priority. The group with the highest priority is labeled a, then b, c, and d. Groups are assigned higher priority based on the atomic number (Z), where higher atomic numbers get higher priority. The atom directly bonded to the chiral center is considered first. If the atom is the same for two groups, the atoms bonded to that atom are considered, and so on until there is a difference. (If there is never a difference, it wasn't a chiral carbon.) Once the groups are labeled, orient the d to the back, then determine whether a-b-c goes clockwise (R) or counterclockwise (S).

>> Example 2

Assign R and S values to the molecules in Example 1.







Solution:

  1. The atoms bonded to the chiral carbon are H, O, and C. Since oxygen has the highest atomic number, it is labeled a. Since hydrogen has the lowest atomic number, it is d. The two carbons have the same atomic number, so the next level of bonding must be considered. The carbon of the methyl group is bonded only to hydrogens. The other carbon is bonded to three more carbons. Since carbon has the higher atomic number, the methyl group is labeled c and the more complicated group is b.

    Tips: You will probably need a model the first few times you determine R and S. If you use one, you don't need to build the entire molecule. Instead, assign specific colors to a, b, c, and d, and build the model as it is shown in the structure. Remember that the dashed wedges indicate that the group is behind the plane and solid wedges mean that the group is in front of the plane. Solid lines indicate that the group is in the plane.

    After the groups are assigned, rotate the d to the back and determine the orientation of a, b, and c. If you are consistent about the colors you use, and pick and familiar sequence (e.g., a = red, b = white, and c = blue), it will be easier to remember. It may also help to use a mnemonic to remember R and S (e.g., R is " right.")

    In this example, when d is oriented toward the back the remaining a, b, and c look like . Then direction (counterclockwise) can be determined. This example has an S chiral center.

  2. The order of the groups are a = OH (oxygen has a higher Z), b = ethyl (two carbons), c = methyl (only one carbon), and d = hydrogen (Z = 1).

    This is also counterclockwise and S.

  3. This example has two carbons. The groups are prioritized for the starred chiral carbon shown below

    Therefore this is an R enantiomer.

    For the other chiral center, the priorities are:

    Therefore this is an S enantiomer.

 

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